Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
P01852 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
P01852 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P01852 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.47□□□□□ -0.25
P01852 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.47□□□□□ -0.25
P01852 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.47□□□□□ -0.25
P01852 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P01852 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P01852 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
P01852 Gm9385-201ENSMUST00000117563 472 ntBASIC13.47□□□□□ -0.25
P01852 Gm11025-201ENSMUST00000140773 466 ntBASIC13.47□□□□□ -0.25
P01852 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.47□□□□□ -0.25
P01852 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
P01852 Rpph1-201ENSMUST00000175096 319 ntBASIC13.47□□□□□ -0.25
P01852 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.47□□□□□ -0.25
P01852 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.47□□□□□ -0.25
P01852 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.47□□□□□ -0.25
P01852 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
P01852 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
P01852 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
P01852 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
P01852 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
P01852 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P01852 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.46□□□□□ -0.25
P01852 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.46□□□□□ -0.25
P01852 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.46□□□□□ -0.25
P01852 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.46□□□□□ -0.25
P01852 Mir1895-201ENSMUST00000122615 79 ntBASIC13.46□□□□□ -0.25
P01852 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
P01852 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Gm16026-204ENSMUST00000162652 683 ntBASIC13.46□□□□□ -0.25
P01852 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
P01852 Gm27494-201ENSMUST00000184735 189 ntBASIC13.46□□□□□ -0.25
P01852 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.46□□□□□ -0.25
P01852 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.46□□□□□ -0.25
P01852 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.46□□□□□ -0.25
P01852 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.46□□□□□ -0.25
P01852 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.46□□□□□ -0.25
P01852 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.46□□□□□ -0.25
P01852 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.46□□□□□ -0.25
P01852 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P01852 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
P01852 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
P01852 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
P01852 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.46□□□□□ -0.26
P01852 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
P01852 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
P01852 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P01852 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
P01852 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
P01852 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms