Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Gm5682-201ENSMUST00000173402 505 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Gm9682-201ENSMUST00000197505 556 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.21□□□□□ -0.29
Hdac3O88895 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hdac3O88895 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hdac3O88895 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hdac3O88895 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hdac3O88895 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.21□□□□□ -0.29
Hdac3O88895 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Hdac3O88895 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.2□□□□□ -0.3
Hdac3O88895 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.2□□□□□ -0.3
Hdac3O88895 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hdac3O88895 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.2□□□□□ -0.3
Hdac3O88895 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.2□□□□□ -0.3
Hdac3O88895 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Hdac3O88895 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.2□□□□□ -0.3
Hdac3O88895 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Hdac3O88895 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hdac3O88895 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
Hdac3O88895 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hdac3O88895 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.19□□□□□ -0.3
Hdac3O88895 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.19□□□□□ -0.3
Hdac3O88895 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Hdac3O88895 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hdac3O88895 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Hdac3O88895 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hdac3O88895 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hdac3O88895 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.18□□□□□ -0.3
Hdac3O88895 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.18□□□□□ -0.3
Hdac3O88895 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hdac3O88895 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms