Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.04■□□□□ -0
ShdO88834 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.04■□□□□ -0
ShdO88834 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.04■□□□□ -0
ShdO88834 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.04■□□□□ -0
ShdO88834 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.04■□□□□ -0
ShdO88834 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.04■□□□□ -0
ShdO88834 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Mir8117-201ENSMUST00000184773 107 ntBASIC15.04■□□□□ -0
ShdO88834 Gm2213-201ENSMUST00000197485 688 ntBASIC15.04■□□□□ -0
ShdO88834 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
ShdO88834 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.04■□□□□ -0
ShdO88834 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
ShdO88834 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
ShdO88834 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ShdO88834 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.03■□□□□ -0
ShdO88834 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.03■□□□□ -0
ShdO88834 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.03■□□□□ -0
ShdO88834 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.03■□□□□ -0
ShdO88834 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ShdO88834 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ShdO88834 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
ShdO88834 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
ShdO88834 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.02■□□□□ -0
ShdO88834 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.02■□□□□ -0
ShdO88834 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ShdO88834 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.02■□□□□ -0
ShdO88834 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.02■□□□□ -0
ShdO88834 Gm2451-201ENSMUST00000199447 999 ntBASIC15.02■□□□□ -0
ShdO88834 Gm10290-201ENSMUST00000200451 999 ntBASIC15.02■□□□□ -0
ShdO88834 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.02■□□□□ -0
ShdO88834 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ShdO88834 Gm10175-201ENSMUST00000086013 645 ntBASIC15.02■□□□□ -0
ShdO88834 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ShdO88834 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
ShdO88834 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
ShdO88834 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
ShdO88834 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
ShdO88834 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ShdO88834 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.01□□□□□ -0.01
ShdO88834 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.01□□□□□ -0.01
ShdO88834 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ShdO88834 Gm15427-201ENSMUST00000117288 531 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms