Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.12□□□□□ -0.31
Slc28a2O88627 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.12□□□□□ -0.31
Slc28a2O88627 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Mir8098-201ENSMUST00000184011 137 ntBASIC13.12□□□□□ -0.31
Slc28a2O88627 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Slc28a2O88627 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Slc28a2O88627 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Gm7222-201ENSMUST00000117512 906 ntBASIC13.11□□□□□ -0.31
Slc28a2O88627 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.11□□□□□ -0.31
Slc28a2O88627 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Gm8318-201ENSMUST00000182954 872 ntBASIC13.11□□□□□ -0.31
Slc28a2O88627 Gm28659-201ENSMUST00000188013 759 ntBASIC13.11□□□□□ -0.31
Slc28a2O88627 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.11□□□□□ -0.31
Slc28a2O88627 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Slc28a2O88627 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc28a2O88627 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.1□□□□□ -0.31
Slc28a2O88627 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.1□□□□□ -0.31
Slc28a2O88627 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Slc28a2O88627 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Slc28a2O88627 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Slc28a2O88627 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.1□□□□□ -0.31
Slc28a2O88627 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.1□□□□□ -0.31
Slc28a2O88627 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Slc28a2O88627 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc28a2O88627 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms