Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cops6O88545 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.92■□□□□ 0.46
Cops6O88545 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.92■□□□□ 0.46
Cops6O88545 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.92■□□□□ 0.46
Cops6O88545 Gm6218-201ENSMUST00000219812 628 ntBASIC17.92■□□□□ 0.46
Cops6O88545 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.92■□□□□ 0.46
Cops6O88545 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cops6O88545 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cops6O88545 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cops6O88545 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Asic1-205ENSMUST00000228185 1818 ntBASIC17.91■□□□□ 0.46
Cops6O88545 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cops6O88545 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cops6O88545 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cops6O88545 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cops6O88545 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cops6O88545 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cops6O88545 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cops6O88545 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Gm3436-201ENSMUST00000179930 840 ntBASIC17.9■□□□□ 0.46
Cops6O88545 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.9■□□□□ 0.46
Cops6O88545 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cops6O88545 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.9■□□□□ 0.46
Cops6O88545 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cops6O88545 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cops6O88545 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.89■□□□□ 0.46
Cops6O88545 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cops6O88545 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cops6O88545 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.89■□□□□ 0.45
Cops6O88545 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cops6O88545 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cops6O88545 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms