Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm22175-201ENSMUST00000175007 78 ntBASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc4a4O88343 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc4a4O88343 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc4a4O88343 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.37■□□□□ 0.37
Slc4a4O88343 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.37■□□□□ 0.37
Slc4a4O88343 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc4a4O88343 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc4a4O88343 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.36■□□□□ 0.37
Slc4a4O88343 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc4a4O88343 Olfr286-202ENSMUST00000205305 969 ntBASIC17.36■□□□□ 0.37
Slc4a4O88343 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc4a4O88343 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc4a4O88343 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc4a4O88343 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.35■□□□□ 0.37
Slc4a4O88343 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.35■□□□□ 0.37
Slc4a4O88343 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.35■□□□□ 0.37
Slc4a4O88343 Gm18049-201ENSMUST00000208909 581 ntBASIC17.35■□□□□ 0.37
Slc4a4O88343 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc4a4O88343 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.35■□□□□ 0.37
Slc4a4O88343 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc4a4O88343 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc4a4O88343 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.35■□□□□ 0.37
Slc4a4O88343 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.34■□□□□ 0.37
Slc4a4O88343 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Slc4a4O88343 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc4a4O88343 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Gm29541-201ENSMUST00000191351 678 ntBASIC17.34■□□□□ 0.37
Slc4a4O88343 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.34■□□□□ 0.37
Slc4a4O88343 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.34■□□□□ 0.37
Slc4a4O88343 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Gm44872-201ENSMUST00000207864 420 ntBASIC17.34■□□□□ 0.37
Slc4a4O88343 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms