Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm27357-201ENSMUST00000183754 135 ntBASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.36□□□□□ -0.27
Pdlim3O70209 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.36□□□□□ -0.27
Pdlim3O70209 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pdlim3O70209 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm11780-201ENSMUST00000136880 516 ntBASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm18489-201ENSMUST00000172565 551 ntBASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.35□□□□□ -0.27
Pdlim3O70209 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pdlim3O70209 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pdlim3O70209 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.34□□□□□ -0.27
Pdlim3O70209 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Gm7284-201ENSMUST00000131667 944 ntBASIC13.34□□□□□ -0.27
Pdlim3O70209 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pdlim3O70209 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.34□□□□□ -0.27
Pdlim3O70209 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.34□□□□□ -0.27
Pdlim3O70209 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms