Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.22□□□□□ -0.45
SncaO55042 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.22□□□□□ -0.45
SncaO55042 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SncaO55042 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.21□□□□□ -0.45
SncaO55042 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.21□□□□□ -0.45
SncaO55042 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.21□□□□□ -0.45
SncaO55042 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SncaO55042 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.21□□□□□ -0.45
SncaO55042 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.21□□□□□ -0.45
SncaO55042 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.21□□□□□ -0.45
SncaO55042 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.21□□□□□ -0.45
SncaO55042 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SncaO55042 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SncaO55042 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SncaO55042 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SncaO55042 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SncaO55042 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.21□□□□□ -0.46
SncaO55042 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.21□□□□□ -0.46
SncaO55042 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SncaO55042 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SncaO55042 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SncaO55042 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SncaO55042 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SncaO55042 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.2□□□□□ -0.46
SncaO55042 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.2□□□□□ -0.46
SncaO55042 Gm18669-201ENSMUST00000216049 778 ntBASIC12.2□□□□□ -0.46
SncaO55042 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.2□□□□□ -0.46
SncaO55042 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SncaO55042 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SncaO55042 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.2□□□□□ -0.46
SncaO55042 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SncaO55042 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
SncaO55042 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SncaO55042 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.19□□□□□ -0.46
SncaO55042 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SncaO55042 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms