Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Npc1O35604 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
Npc1O35604 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.38□□□□□ -0.11
Npc1O35604 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.38□□□□□ -0.11
Npc1O35604 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Npc1O35604 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.38□□□□□ -0.11
Npc1O35604 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Npc1O35604 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Npc1O35604 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Npc1O35604 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Npc1O35604 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Npc1O35604 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Npc1O35604 Gm9385-201ENSMUST00000117563 472 ntBASIC14.37□□□□□ -0.11
Npc1O35604 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Gm18057-201ENSMUST00000208220 503 ntBASIC14.37□□□□□ -0.11
Npc1O35604 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.37□□□□□ -0.11
Npc1O35604 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.37□□□□□ -0.11
Npc1O35604 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Npc1O35604 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Npc1O35604 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Npc1O35604 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.36□□□□□ -0.11
Npc1O35604 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.36□□□□□ -0.11
Npc1O35604 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.36□□□□□ -0.11
Npc1O35604 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Npc1O35604 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.36□□□□□ -0.11
Npc1O35604 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Npc1O35604 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.35□□□□□ -0.11
Npc1O35604 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.35□□□□□ -0.11
Npc1O35604 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Npc1O35604 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms