Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
Trove2O08848 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.15■□□□□ 0.02
Trove2O08848 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trove2O08848 Gm23547-201ENSMUST00000158210 271 ntBASIC15.15■□□□□ 0.02
Trove2O08848 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.15■□□□□ 0.02
Trove2O08848 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Trove2O08848 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trove2O08848 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trove2O08848 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trove2O08848 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.14■□□□□ 0.01
Trove2O08848 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.14■□□□□ 0.01
Trove2O08848 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trove2O08848 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trove2O08848 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.13■□□□□ 0.01
Trove2O08848 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.13■□□□□ 0.01
Trove2O08848 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Gm8655-201ENSMUST00000221159 852 ntBASIC15.13■□□□□ 0.01
Trove2O08848 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.13■□□□□ 0.01
Trove2O08848 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trove2O08848 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trove2O08848 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trove2O08848 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.13■□□□□ 0.01
Trove2O08848 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.13■□□□□ 0.01
Trove2O08848 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trove2O08848 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trove2O08848 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Trove2O08848 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms