Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.07■□□□□ 0
Ercc2O08811 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.07■□□□□ 0
Ercc2O08811 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.07■□□□□ 0
Ercc2O08811 Gm15483-201ENSMUST00000120338 456 ntBASIC15.07■□□□□ 0
Ercc2O08811 Gm11594-201ENSMUST00000122313 162 ntBASIC15.07■□□□□ 0
Ercc2O08811 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.07■□□□□ 0
Ercc2O08811 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.07■□□□□ 0
Ercc2O08811 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.07■□□□□ 0
Ercc2O08811 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ercc2O08811 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ercc2O08811 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ercc2O08811 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ercc2O08811 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ercc2O08811 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ercc2O08811 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Gm11025-201ENSMUST00000140773 466 ntBASIC15.06■□□□□ 0
Ercc2O08811 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.06■□□□□ 0
Ercc2O08811 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Gm2451-201ENSMUST00000199447 999 ntBASIC15.06■□□□□ 0
Ercc2O08811 Gm10290-201ENSMUST00000200451 999 ntBASIC15.06■□□□□ 0
Ercc2O08811 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.06■□□□□ 0
Ercc2O08811 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ercc2O08811 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ercc2O08811 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ercc2O08811 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ercc2O08811 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.05■□□□□ -0
Ercc2O08811 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.05■□□□□ -0
Ercc2O08811 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.05■□□□□ -0
Ercc2O08811 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.05■□□□□ -0
Ercc2O08811 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.05■□□□□ -0
Ercc2O08811 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.05■□□□□ -0
Ercc2O08811 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Ercc2O08811 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
Ercc2O08811 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.05■□□□□ -0
Ercc2O08811 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ercc2O08811 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ercc2O08811 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.04■□□□□ -0
Ercc2O08811 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Ercc2O08811 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ercc2O08811 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ercc2O08811 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms