Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Gm24158-201ENSMUST00000175263 71 ntBASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
E030018B13RikJ3QMS9 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm13015-201ENSMUST00000118674 204 ntBASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm5867-201ENSMUST00000063197 592 ntBASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
E030018B13RikJ3QMS9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Gm15693-201ENSMUST00000120470 637 ntBASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Gm23547-201ENSMUST00000158210 271 ntBASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
E030018B13RikJ3QMS9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
E030018B13RikJ3QMS9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms