Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chrna9G3X8Z7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chrna9G3X8Z7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm37230-201ENSMUST00000194491 818 ntBASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chrna9G3X8Z7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Psmb5-202ENSMUST00000227257 622 ntBASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chrna9G3X8Z7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chrna9G3X8Z7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms