Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pcdh11xF6ZNL5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh11xF6ZNL5 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm9385-201ENSMUST00000117563 472 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh11xF6ZNL5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh11xF6ZNL5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.24■□□□□ 0.19
Pcdh11xF6ZNL5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms