Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm16198-201ENSMUST00000118766 670 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm5364-201ENSMUST00000216789 889 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Thap2-203ENSMUST00000218989 527 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gm10154-201ENSMUST00000084445 354 ntBASIC15.12■□□□□ 0.01
Atf6F6VAN0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atf6F6VAN0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.11■□□□□ 0.01
Atf6F6VAN0 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.11■□□□□ 0.01
Atf6F6VAN0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.11■□□□□ 0.01
Atf6F6VAN0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atf6F6VAN0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gm12134-201ENSMUST00000122109 520 ntBASIC15.1■□□□□ 0.01
Atf6F6VAN0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms