Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.93□□□□□ -0.02
Ccdc149F6V035 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.93□□□□□ -0.02
Ccdc149F6V035 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc149F6V035 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm5566-201ENSMUST00000116118 459 ntBASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm8749-201ENSMUST00000117737 331 ntBASIC14.92□□□□□ -0.02
Ccdc149F6V035 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm27437-201ENSMUST00000183429 107 ntBASIC14.92□□□□□ -0.02
Ccdc149F6V035 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.92□□□□□ -0.02
Ccdc149F6V035 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.92□□□□□ -0.02
Ccdc149F6V035 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc149F6V035 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm24543-201ENSMUST00000103867 82 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm27533-201ENSMUST00000183800 152 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm2451-201ENSMUST00000199447 999 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm10290-201ENSMUST00000200451 999 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.91□□□□□ -0.02
Ccdc149F6V035 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc149F6V035 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms