Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.61■□□□□ 0.41
Ube4aE9Q735 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Gm45195-201ENSMUST00000205597 1008 ntBASIC17.61■□□□□ 0.41
Ube4aE9Q735 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.61■□□□□ 0.41
Ube4aE9Q735 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ube4aE9Q735 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.6■□□□□ 0.41
Ube4aE9Q735 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.6■□□□□ 0.41
Ube4aE9Q735 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.6■□□□□ 0.41
Ube4aE9Q735 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ube4aE9Q735 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.59■□□□□ 0.41
Ube4aE9Q735 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Gm9522-201ENSMUST00000182394 926 ntBASIC17.59■□□□□ 0.41
Ube4aE9Q735 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ube4aE9Q735 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4aE9Q735 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4aE9Q735 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ube4aE9Q735 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ube4aE9Q735 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms