Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clip3B9EHT4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.29□□□□□ -0.12
Clip3B9EHT4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.29□□□□□ -0.12
Clip3B9EHT4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.29□□□□□ -0.12
Clip3B9EHT4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.29□□□□□ -0.12
Clip3B9EHT4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.29□□□□□ -0.12
Clip3B9EHT4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clip3B9EHT4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clip3B9EHT4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.27□□□□□ -0.12
Clip3B9EHT4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.27□□□□□ -0.13
Clip3B9EHT4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.27□□□□□ -0.13
Clip3B9EHT4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.27□□□□□ -0.13
Clip3B9EHT4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms