Protein–RNA interactions for Protein: B2RXQ2

Ppfia1, Ppfia1 protein, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppfia1B2RXQ2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ppfia1B2RXQ2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ppfia1B2RXQ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ppfia1B2RXQ2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Gm17271-201ENSMUST00000165535 355 ntBASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Gm8000-201ENSMUST00000188378 592 ntBASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ppfia1B2RXQ2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ppfia1B2RXQ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ppfia1B2RXQ2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm5479-201ENSMUST00000160578 435 ntBASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ppfia1B2RXQ2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms