Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.42□□□□□ -0.1
Chd3B1AR17 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Chd3B1AR17 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Gm24543-201ENSMUST00000103867 82 ntBASIC14.42□□□□□ -0.1
Chd3B1AR17 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.42□□□□□ -0.1
Chd3B1AR17 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Gm24158-201ENSMUST00000175263 71 ntBASIC14.42□□□□□ -0.1
Chd3B1AR17 Gm18766-201ENSMUST00000189811 808 ntBASIC14.42□□□□□ -0.1
Chd3B1AR17 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd3B1AR17 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Olfr286-202ENSMUST00000205305 969 ntBASIC14.41□□□□□ -0.1
Chd3B1AR17 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd3B1AR17 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd3B1AR17 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Gm27533-201ENSMUST00000183800 152 ntBASIC14.4□□□□□ -0.1
Chd3B1AR17 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Gm14719-201ENSMUST00000121891 340 ntBASIC14.4□□□□□ -0.1
Chd3B1AR17 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Shd-206ENSMUST00000225145 998 ntBASIC14.4□□□□□ -0.1
Chd3B1AR17 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chd3B1AR17 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd3B1AR17 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.39□□□□□ -0.11
Chd3B1AR17 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd3B1AR17 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms