Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd6A3KFM7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gm12566-201ENSMUST00000121479 359 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gm15429-201ENSMUST00000151268 798 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.82□□□□□ -0.52
Chd6A3KFM7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chd6A3KFM7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Gm37008-201ENSMUST00000195712 319 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 Gm6334-201ENSMUST00000207083 228 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.81□□□□□ -0.52
Chd6A3KFM7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chd6A3KFM7 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Gm13786-201ENSMUST00000122371 333 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Gm44545-201ENSMUST00000208262 746 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.8□□□□□ -0.52
Chd6A3KFM7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.8□□□□□ -0.52
Chd6A3KFM7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chd6A3KFM7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms