Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc112A0AUP1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc112A0AUP1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc112A0AUP1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc112A0AUP1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc112A0AUP1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc112A0AUP1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Ccdc112A0AUP1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc112A0AUP1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc112A0AUP1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Ccdc112A0AUP1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms