Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gm2651-201ENSMUST00000203560 838 ntBASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
1700028J19RikA0A0U1RP08 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
1700028J19RikA0A0U1RP08 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
1700028J19RikA0A0U1RP08 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Gm13597-201ENSMUST00000121239 375 ntBASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
1700028J19RikA0A0U1RP08 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
1700028J19RikA0A0U1RP08 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms