Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Gm17807-201ENSMUST00000186869 298 ntBASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv29A0A0G2LB96 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Gm13418-201ENSMUST00000119097 944 ntBASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Gm6089-201ENSMUST00000197666 938 ntBASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.23□□□□□ -0.45
Trbv29A0A0G2LB96 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms