Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav9n-2A0A0G2JDP3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav9n-2A0A0G2JDP3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms