Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.72□□□□□ -0.53
Trav17A0A075B655 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav17A0A075B655 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav17A0A075B655 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Gm10252-201ENSMUST00000209541 832 ntBASIC11.71□□□□□ -0.53
Trav17A0A075B655 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav17A0A075B655 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav17A0A075B655 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.7□□□□□ -0.54
Trav17A0A075B655 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav17A0A075B655 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav17A0A075B655 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav17A0A075B655 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav17A0A075B655 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav17A0A075B655 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav17A0A075B655 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav17A0A075B655 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms