Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gm12008-201ENSMUST00000117791 755 ntBASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gm6433-201ENSMUST00000118634 875 ntBASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gm11950-201ENSMUST00000121615 838 ntBASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.41□□□□□ -0.58
Trav16A0A075B653 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.41□□□□□ -0.58
Trav16A0A075B653 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16A0A075B653 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.4□□□□□ -0.58
Trav16A0A075B653 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Gm44454-201ENSMUST00000198541 138 ntBASIC11.4□□□□□ -0.58
Trav16A0A075B653 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav16A0A075B653 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16A0A075B653 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav16A0A075B653 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav16A0A075B653 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16A0A075B653 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16A0A075B653 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.4□□□□□ -0.59
Trav16A0A075B653 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.39□□□□□ -0.59
Trav16A0A075B653 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.39□□□□□ -0.59
Trav16A0A075B653 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Carlr-201ENSMUST00000181515 2574 ntBASIC11.39□□□□□ -0.59
Trav16A0A075B653 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms