Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm17971-201ENSMUST00000190239 806 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gm7787-201ENSMUST00000216858 688 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav5-4A0A075B652 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Gm7230-201ENSMUST00000173026 815 ntBASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav5-4A0A075B652 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav5-4A0A075B652 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav5-4A0A075B652 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav5-4A0A075B652 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Gm7153-201ENSMUST00000117092 455 ntBASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Gm6550-201ENSMUST00000187574 993 ntBASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Trav5-4A0A075B652 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5-4A0A075B652 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms