Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cr1Q9Z0D9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cr1Q9Z0D9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cx3cr1Q9Z0D9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cr1Q9Z0D9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cx3cr1Q9Z0D9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm7506-201ENSMUST00000207758 815 ntBASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cx3cr1Q9Z0D9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Olfr129-201ENSMUST00000122318 993 ntBASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cr1Q9Z0D9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Gm27867-201ENSMUST00000184778 125 ntBASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cr1Q9Z0D9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.47□□□□□ -0.41
Cx3cr1Q9Z0D9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms