Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Clcn2Q9R0A1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gm18206-201ENSMUST00000207027 926 ntBASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Clcn2Q9R0A1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clcn2Q9R0A1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clcn2Q9R0A1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Clcn2Q9R0A1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.08■□□□□ 0
Clcn2Q9R0A1 Gm5364-201ENSMUST00000216789 889 ntBASIC15.08■□□□□ 0
Clcn2Q9R0A1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.08■□□□□ 0
Clcn2Q9R0A1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.08■□□□□ 0
Clcn2Q9R0A1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Gm9682-201ENSMUST00000197505 556 ntBASIC15.07■□□□□ 0
Clcn2Q9R0A1 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.07■□□□□ 0
Clcn2Q9R0A1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn2Q9R0A1 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn2Q9R0A1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms