Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Clcf1Q9QZM3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gm16198-201ENSMUST00000118766 670 ntBASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gm27494-201ENSMUST00000184735 189 ntBASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcf1Q9QZM3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Mir1895-201ENSMUST00000122615 79 ntBASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm2272-201ENSMUST00000194903 582 ntBASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcf1Q9QZM3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcf1Q9QZM3 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms