Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Smco4Q9JIS3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Il3ra-202ENSMUST00000223589 738 ntBASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Gm7367-201ENSMUST00000057611 492 ntBASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Dio3-201ENSMUST00000097228 1449 ntBASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Smco4Q9JIS3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Mir5133-201ENSMUST00000174955 77 ntBASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Smco4Q9JIS3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms