Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Gm11452-201ENSMUST00000122376 690 ntBASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.84□□□□□ -0.19
Trim39Q9ESN2 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim39Q9ESN2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.83□□□□□ -0.19
Trim39Q9ESN2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Gm25990-201ENSMUST00000102440 86 ntBASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Mir8098-201ENSMUST00000184011 137 ntBASIC13.83□□□□□ -0.2
Trim39Q9ESN2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim39Q9ESN2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm14722-201ENSMUST00000118943 689 ntBASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm5864-201ENSMUST00000202263 970 ntBASIC13.82□□□□□ -0.2
Trim39Q9ESN2 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim39Q9ESN2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms