Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp4bQ9D8B3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chmp4bQ9D8B3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Mir8117-201ENSMUST00000184773 107 ntBASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.54■□□□□ 0.56
Chmp4bQ9D8B3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp4bQ9D8B3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Gm23547-201ENSMUST00000158210 271 ntBASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp4bQ9D8B3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp4bQ9D8B3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp4bQ9D8B3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms