Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.99□□□□□ -0.17
Upk1aQ9D132 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk1aQ9D132 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Upk1aQ9D132 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.98□□□□□ -0.17
Upk1aQ9D132 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.98□□□□□ -0.17
Upk1aQ9D132 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Upk1aQ9D132 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.97□□□□□ -0.17
Upk1aQ9D132 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Upk1aQ9D132 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.96□□□□□ -0.17
Upk1aQ9D132 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Upk1aQ9D132 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.96□□□□□ -0.18
Upk1aQ9D132 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Upk1aQ9D132 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upk1aQ9D132 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms