Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Lysmd1Q9D0E3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lysmd1Q9D0E3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Lysmd1Q9D0E3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Lysmd1Q9D0E3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Lysmd1Q9D0E3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Snord83b-201ENSMUST00000104546 94 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Gm4909-201ENSMUST00000118749 794 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Gm11524-201ENSMUST00000119349 807 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Gm8810-201ENSMUST00000172895 754 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Gm6621-201ENSMUST00000193251 772 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lysmd1Q9D0E3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Gm5425-201ENSMUST00000214125 459 ntBASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lysmd1Q9D0E3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Gm19208-201ENSMUST00000213861 912 ntBASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Lysmd1Q9D0E3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lysmd1Q9D0E3 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms