Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.04■□□□□ 0.16
Ssr1Q9CY50 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44357-201ENSMUST00000195897 142 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm19658-201ENSMUST00000196231 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44367-201ENSMUST00000196836 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44350-201ENSMUST00000197197 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44390-201ENSMUST00000197533 144 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44313-201ENSMUST00000198018 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44486-201ENSMUST00000198508 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44314-201ENSMUST00000199263 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44394-201ENSMUST00000199558 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44484-201ENSMUST00000199873 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44466-201ENSMUST00000200264 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44359-201ENSMUST00000200671 138 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.03■□□□□ 0.16
Ssr1Q9CY50 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ssr1Q9CY50 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Gm9103-201ENSMUST00000119371 405 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.02■□□□□ 0.16
Ssr1Q9CY50 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ssr1Q9CY50 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Ssr1Q9CY50 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms