Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retreg3Q9CQV4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg3Q9CQV4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg3Q9CQV4 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm14776-201ENSMUST00000121029 887 ntBASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Rpph1-201ENSMUST00000175096 319 ntBASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm28975-201ENSMUST00000186412 686 ntBASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms