Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H2afb1Q9CQ70 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
H2afb1Q9CQ70 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
H2afb1Q9CQ70 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.08□□□□□ -0.47
H2afb1Q9CQ70 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Gm13036-201ENSMUST00000117799 748 ntBASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Gm28659-201ENSMUST00000188013 759 ntBASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H2afb1Q9CQ70 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Gm5864-201ENSMUST00000202263 970 ntBASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H2afb1Q9CQ70 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H2afb1Q9CQ70 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms