Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Gm38002-201ENSMUST00000193255 180 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Gm44608-201ENSMUST00000206827 855 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Gm24526-201ENSMUST00000082921 158 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdh15Q99PJ1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Gm27516-201ENSMUST00000184237 98 ntBASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Gm8810-201ENSMUST00000172895 754 ntBASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh15Q99PJ1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Gm6152-201ENSMUST00000151704 340 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Gm7584-201ENSMUST00000175829 940 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Proscos-202ENSMUST00000178990 666 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Gm43133-201ENSMUST00000197472 463 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Gm6013-201ENSMUST00000212264 699 ntBASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh15Q99PJ1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm27331-201ENSMUST00000183705 60 ntBASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm18056-201ENSMUST00000207670 568 ntBASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm18061-201ENSMUST00000208350 562 ntBASIC16.35■□□□□ 0.21
Pcdh15Q99PJ1 Gm18063-201ENSMUST00000208529 568 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms