Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Col25a1Q99MQ5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col25a1Q99MQ5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm9797-201ENSMUST00000052902 613 ntBASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col25a1Q99MQ5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col25a1Q99MQ5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms