Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf111Q99ML9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rnf111Q99ML9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.33□□□□□ -0.12
Rnf111Q99ML9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 AV026068-213ENSMUST00000223675 1171 ntBASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Mzt1-203ENSMUST00000227948 952 ntBASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rnf111Q99ML9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Rnf111Q99ML9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.31□□□□□ -0.12
Rnf111Q99ML9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms