Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm25287-201ENSMUST00000103846 110 ntBASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm22918-201ENSMUST00000103855 110 ntBASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd3Q99LE3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Gm25948-201ENSMUST00000175334 112 ntBASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Gm7774-201ENSMUST00000200064 533 ntBASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd3Q99LE3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm24158-201ENSMUST00000175263 71 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm38225-201ENSMUST00000194001 393 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm10253-201ENSMUST00000194270 940 ntBASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd3Q99LE3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Lysmd3Q99LE3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms