Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.25□□□□□ -0.13
Vmp1Q99KU0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmp1Q99KU0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.24□□□□□ -0.13
Vmp1Q99KU0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.23□□□□□ -0.13
Vmp1Q99KU0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vmp1Q99KU0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms