Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Mir3081-201ENSMUST00000175305 84 ntBASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Gm17808-201ENSMUST00000200859 894 ntBASIC13.05□□□□□ -0.32
Chmp1aQ921W0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chmp1aQ921W0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Gm8318-201ENSMUST00000182954 872 ntBASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chmp1aQ921W0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Gm25745-201ENSMUST00000174945 133 ntBASIC13.03□□□□□ -0.32
Chmp1aQ921W0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chmp1aQ921W0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chmp1aQ921W0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms