Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gm6736-201ENSMUST00000166583 948 ntBASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha3Q91Y16 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm15427-201ENSMUST00000117288 531 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm12134-201ENSMUST00000122109 520 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm17968-201ENSMUST00000194902 784 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Gm45747-201ENSMUST00000212203 999 ntBASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha3Q91Y16 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm10154-201ENSMUST00000084445 354 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdha3Q91Y16 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdha3Q91Y16 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms