Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Gm5479-201ENSMUST00000160578 435 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Gm27920-201ENSMUST00000183953 96 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdha9Q91Y11 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Rprl2-201ENSMUST00000157150 290 ntBASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Gm45098-201ENSMUST00000207179 657 ntBASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdha9Q91Y11 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm11745-201ENSMUST00000121669 448 ntBASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm37935-201ENSMUST00000192012 982 ntBASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm9182-201ENSMUST00000217829 639 ntBASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdha9Q91Y11 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdha9Q91Y11 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms