Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb22Q91XZ8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb22Q91XZ8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb22Q91XZ8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb22Q91XZ8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Gm2810-201ENSMUST00000118681 990 ntBASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Gm27702-201ENSMUST00000184512 56 ntBASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.19■□□□□ 0.34
Pcdhb22Q91XZ8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Gm6736-201ENSMUST00000166583 948 ntBASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Gm18889-201ENSMUST00000174284 929 ntBASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb22Q91XZ8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb22Q91XZ8 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms