Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trex1Q91XB0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trex1Q91XB0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trex1Q91XB0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.83■□□□□ 0.28
Trex1Q91XB0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Gm6218-201ENSMUST00000219812 628 ntBASIC16.83■□□□□ 0.28
Trex1Q91XB0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Asic1-205ENSMUST00000228185 1818 ntBASIC16.83■□□□□ 0.28
Trex1Q91XB0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trex1Q91XB0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trex1Q91XB0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms