Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vsx1Q91V10 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vsx1Q91V10 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vsx1Q91V10 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vsx1Q91V10 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Vsx1Q91V10 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm18062-201ENSMUST00000208020 547 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm18055-201ENSMUST00000208254 547 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.58□□□□□ -0.08
Vsx1Q91V10 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Vsx1Q91V10 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gm14722-201ENSMUST00000118943 689 ntBASIC14.57□□□□□ -0.08
Vsx1Q91V10 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gm6007-201ENSMUST00000208170 823 ntBASIC14.57□□□□□ -0.08
Vsx1Q91V10 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gm9899-201ENSMUST00000065519 555 ntBASIC14.57□□□□□ -0.08
Vsx1Q91V10 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.57□□□□□ -0.08
Vsx1Q91V10 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
Vsx1Q91V10 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm14042-201ENSMUST00000120139 833 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm12091-201ENSMUST00000146791 830 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.56□□□□□ -0.08
Vsx1Q91V10 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.56□□□□□ -0.08
Vsx1Q91V10 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vsx1Q91V10 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms